Power

  • A poem about type II errors in diagnostic testing using a diabetes test context.  The poem was written by Lawrence Lesser from The University of Texas at El Paso and received an honorable mention in the non-song category of the 2023 A-mu-sing Competition.  The author also provided the following outline for a lesson plan:

    Some sample questions (one per stanza) students can explore or discuss
    as a practical application of statistics to a prevalent disease
    that likely affects (or will) a friend or relative of almost everyone.

    First stanza: Look up history of diabetes prevalence to explore questions such as: Is “1 in 10” roughly accurate for the United States and how does that compare to other countries? Was the 2003 lowering of the threshold for a prediabetes diagnosis based on updated medical understanding of the disease or more of a policy decision to give an “earlier warning”?

    Second stanza: How does a hypothesis testing framework apply to an oral glucose tolerance test (OGTT)? It’s warned that a false positive is possible if the patient did not eat at least 150g of carbohydrates for each of the 3 days before the test. (This is likely what happened to the poet, whose diagnosis was overturned just 2 months later by an endocrinologist.)

    Third stanza: Given the usual trend that the null hypothesis usually means no effect, no difference, nothing special, explain whether it seems consistent that a normality test such as Anderson-Darling would let normality be the null. When might it make sense for a doctor to view having a particular disease as the null hypothesis (and what would be the Type I and Type II errors?)?

    Fourth stanza: Explain how having only a few individual values each day from a blood glucose meter (BGM) risks missing dangerously high variability of glucose (students can Google how high variability can be a risk factor for hypoglycemia and diabetes complications). Discuss how output from a Continuous Glucose Monitor (CGM) that records values every 5 minutes can be used to check, for example, that the coefficient of variation is sufficiently low (e.g., < 36%) and that “time in range” (e.g., 70-180 or 70-140 mg/dL) is sufficiently high. Example output is on page S86 of https://diabetesjournals.org/care/issue/45/Supplement_1.

    Fifth stanza: Have students look up current FDA guidelines on how accurate over-the-counter BGM readings need to be (e.g., https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7753858/) and have them connect this to margin of error, confidence intervals, etc.

    Sixth stanza: Find online the diabetes “plate method” of taking a circular plate (9” in diameter) for a meal where half of the plate would have non-starchy vegetables, a quarter having lean protein, and a quarter with carbohydrate foods such as whole grains. How do this breakdown and total quantity compare to a pie chart of a typical meal that you (or typical college undergraduates) eat?

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  • This presentation is a part of a series of lessons on the Analysis of Categorical Data. This lecture covers the following: iterative solutions to non-linear equations, score equations for exponential class variables, Newton-Raphson vs. Fisher’s Scoring, Logistic Regression for an R × 2 tables, saturated model, odds ratios when rows are not ordinal, goodness of fit, likelihood ratio statistic for nested models, and residuals.

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  • This presentation is a part of a series of lessons on the Analysis of Categorical Data. This lecture covers the following: linear association, correlation coefficient, ridits/modified ridits, nonparametric methods, Cochran-Armitage Trend test, 

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  • This is a graduate level survey course that stresses the concepts of statistical design and analysis in biomedical research, with special emphasis on clinical trials. Perfect for students and teachers wanting to learn/acquire materials for this topic.

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  • This handout lists the most commonly used effect sizes, adjustments, and rules of thumb concerning sample size calculation. 

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  • When does a significant p-value indicate a true effect?  This app will help with understanding the Positive Predictive Value (PPV) of a p-value.

    This app is based on Ioannidis, J. P. A. (2005). Why most published research findings are false. PLoS Medicine, 2(8), e124. http://doi.org/10.1371/journal.pmed.0020124

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  • Use presets or change parameter values manually to explore the cost-effectiveness of different research approaches to unearth true scientific discoveries. For detailed explanation and conceptual background, see LeBel, Campbell, & Loving (in press, JPSP), Table 3. This app is an extension of Zehetleitner and Felix Schönbrodt's (2016) positive predictive value app

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  • Plot the theoretical p-value distribution and power curve for an independent t-test based on the effect size, sample size, and alpha.

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  • A song that can be used in discussing the meaning and interpretation of Type II error in Significance Testing. The lyrics were written by Mary McLellan from Aledo High School in Aledo, Texas as one of several dozen songs created for her AP statistics course. The song may be sung to the tune of “Barbara Ann,” written by Fred Fassert in 1961 and popularized by the Beach Boys in 1965. Also, an accompanying video may be found at
    https://www.youtube.com/watch?v=NjLiNJLhHzc

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  • A song to be used in discussing the concept and interpretation of the power of a significance test. The lyrics were written by Mary McLellan from Aledo High School in Aledo, Texas as one of several dozen songs created for her AP statistics course. The song may be sung to the tune of the 1977 hit song “Hotel California,” by the Eagles. Also, an accompanying video may be found at
    https://igenapps.com/Apps/View/Index/933086

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